vtkvmtkVesselEnhancingDiffusion3DImageFilter Class Reference

Wrapper class around itk::VesselEnhancingDiffusion3DImageFilter. More...

#include <vtkvmtkVesselEnhancingDiffusion3DImageFilter.h>

Inheritance diagram for vtkvmtkVesselEnhancingDiffusion3DImageFilter:

Collaboration diagram for vtkvmtkVesselEnhancingDiffusion3DImageFilter:

Public Types
enum	{ EQUISPACED_STEPS, LOGARITHMIC_STEPS }
typedef vtkvmtkITKImageToImageFilterFF	Superclass

Public Member Functions
virtual int	IsA (const char *type)
vtkvmtkVesselEnhancingDiffusion3DImageFilter *	NewInstance () const
virtual void	SetSigmaMin (double)
virtual double	GetSigmaMin ()
virtual void	SetSigmaMax (double)
virtual double	GetSigmaMax ()
virtual void	SetNumberOfSigmaSteps (int)
virtual int	GetNumberOfSigmaSteps ()
void	SetSigmaStepMethodToEquispaced ()
void	SetSigmaStepMethodToLogarithmic ()
void	SetTimeStep (double value)
void	SetEpsilon (double value)
void	SetOmega (double value)
void	SetSensitivity (double value)
void	SetNumberOfIterations (int value)
void	SetAlpha (double value)
void	SetBeta (double value)
void	SetGamma (double value)
void	SetRecalculateVesselness (int value)
double	ComputeSigmaValue (int scaleLevel)
void	Update ()

Static Public Member Functions
static vtkvmtkVesselEnhancingDiffusion3DImageFilter *	New ()
static int	IsTypeOf (const char *type)
static vtkvmtkVesselEnhancingDiffusion3DImageFilter *	SafeDownCast (vtkObjectBase *o)

Protected Types
typedef itk::VesselEnhancingDiffusion3DImageFilter< Superclass::InputImageType::PixelType >	ImageFilterType

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkvmtkVesselEnhancingDiffusion3DImageFilter ()
	~vtkvmtkVesselEnhancingDiffusion3DImageFilter ()
ImageFilterType *	GetImageFilterPointer ()

Protected Attributes
double	SigmaMin
double	SigmaMax
int	NumberOfSigmaSteps
int	SigmaStepMethod

Detailed Description

Wrapper class around itk::VesselEnhancingDiffusion3DImageFilter.

Date

2006/04/06 16:48:25

Revision

1.2

vtkvmtkVesselEnhancingDiffusion3DImageFilter

Definition at line 42 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

Member Typedef Documentation

Superclass

typedef vtkvmtkITKImageToImageFilterFF vtkvmtkVesselEnhancingDiffusion3DImageFilter::Superclass

Definition at line 46 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

ImageFilterType

typedef itk::VesselEnhancingDiffusion3DImageFilter<Superclass::InputImageType::PixelType> vtkvmtkVesselEnhancingDiffusion3DImageFilter::ImageFilterType

protected

Definition at line 182 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

Enumerator
EQUISPACED_STEPS
LOGARITHMIC_STEPS

Definition at line 173 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    EQUISPACED_STEPS,
    LOGARITHMIC_STEPS
  };

Constructor & Destructor Documentation

vtkvmtkVesselEnhancingDiffusion3DImageFilter()

vtkvmtkVesselEnhancingDiffusion3DImageFilter::vtkvmtkVesselEnhancingDiffusion3DImageFilter ( )

inlineprotected

Definition at line 184 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

                                                 : Superclass(ImageFilterType::New()) 
  {
    this->SigmaMin = 0.0;
    this->SigmaMax = 0.0;
    this->NumberOfSigmaSteps = 0;
    this->SigmaStepMethod = EQUISPACED_STEPS;

    this->GetImageFilterPointer()->SetDefaultPars();
  }

~vtkvmtkVesselEnhancingDiffusion3DImageFilter()

vtkvmtkVesselEnhancingDiffusion3DImageFilter::~vtkvmtkVesselEnhancingDiffusion3DImageFilter ( )

inlineprotected

Definition at line 194 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

{};

Member Function Documentation

New()

static vtkvmtkVesselEnhancingDiffusion3DImageFilter* vtkvmtkVesselEnhancingDiffusion3DImageFilter::New ( )

static

IsTypeOf()

static int vtkvmtkVesselEnhancingDiffusion3DImageFilter::IsTypeOf ( const char *  type )

static

IsA()

virtual int vtkvmtkVesselEnhancingDiffusion3DImageFilter::IsA ( const char *  type )

virtual

SafeDownCast()

static vtkvmtkVesselEnhancingDiffusion3DImageFilter* vtkvmtkVesselEnhancingDiffusion3DImageFilter::SafeDownCast ( vtkObjectBase *  o )

static

NewInstanceInternal()

virtual vtkObjectBase* vtkvmtkVesselEnhancingDiffusion3DImageFilter::NewInstanceInternal ( ) const

protectedvirtual

NewInstance()

vtkvmtkVesselEnhancingDiffusion3DImageFilter* vtkvmtkVesselEnhancingDiffusion3DImageFilter::NewInstance

(

)

const

SetSigmaMin()

virtual void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetSigmaMin ( double  )

virtual

GetSigmaMin()

virtual double vtkvmtkVesselEnhancingDiffusion3DImageFilter::GetSigmaMin ( )

virtual

SetSigmaMax()

virtual void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetSigmaMax ( double  )

virtual

GetSigmaMax()

virtual double vtkvmtkVesselEnhancingDiffusion3DImageFilter::GetSigmaMax ( )

virtual

SetNumberOfSigmaSteps()

virtual void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetNumberOfSigmaSteps ( int  )

virtual

GetNumberOfSigmaSteps()

virtual int vtkvmtkVesselEnhancingDiffusion3DImageFilter::GetNumberOfSigmaSteps ( )

virtual

SetSigmaStepMethodToEquispaced()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetSigmaStepMethodToEquispaced ( )

inline

Definition at line 57 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    this->SigmaStepMethod = EQUISPACED_STEPS;
  }

SetSigmaStepMethodToLogarithmic()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetSigmaStepMethodToLogarithmic ( )

inline

Definition at line 62 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    this->SigmaStepMethod = LOGARITHMIC_STEPS;
  }

SetTimeStep()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetTimeStep ( double  value )

inline

Definition at line 67 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetTimeStep,value);
  }

SetEpsilon()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetEpsilon ( double  value )

inline

Definition at line 72 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetEpsilon,value);
  }

SetOmega()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetOmega ( double  value )

inline

Definition at line 77 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetOmega,value);
  }

SetSensitivity()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetSensitivity ( double  value )

inline

Definition at line 82 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetSensitivity,value);
  }

SetNumberOfIterations()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetNumberOfIterations ( int  value )

inline

Definition at line 87 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetIterations,value);
  }

SetAlpha()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetAlpha ( double  value )

inline

Definition at line 92 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetAlpha,value);
  }

SetBeta()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetBeta ( double  value )

inline

Definition at line 97 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetBeta,value);
  }

SetGamma()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetGamma ( double  value )

inline

Definition at line 102 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetGamma,value);
  }

SetRecalculateVesselness()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::SetRecalculateVesselness ( int  value )

inline

Definition at line 107 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    DelegateITKInputMacro(SetRecalculateVesselness,value);
  }

ComputeSigmaValue()

double vtkvmtkVesselEnhancingDiffusion3DImageFilter::ComputeSigmaValue ( int  scaleLevel )

inline

Definition at line 112 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    double sigmaValue;

    if (this->NumberOfSigmaSteps < 2)
    {
      return this->SigmaMin;
    }

    switch (this->SigmaStepMethod)
      {
      case EQUISPACED_STEPS:
        {
        double stepSize = ( SigmaMax - SigmaMin ) / (NumberOfSigmaSteps-1);
        if (stepSize < 1e-10)
          {
          stepSize = 1e-10;
          }
        sigmaValue = SigmaMin + stepSize * scaleLevel;
        break;
        }
      case LOGARITHMIC_STEPS:
        {
        double stepSize = ( vcl_log(SigmaMax) - vcl_log(SigmaMin) ) / (NumberOfSigmaSteps-1);
        if (stepSize < 1e-10)
          {
          stepSize = 1e-10;
          }
        sigmaValue = vcl_exp( vcl_log (SigmaMin) + stepSize * scaleLevel);
        break;
        }
      default:
        vtkErrorMacro("Error: undefined sigma step method.");
        sigmaValue = 0.0;
        break;
      }

    return sigmaValue;
  }

Update()

void vtkvmtkVesselEnhancingDiffusion3DImageFilter::Update ( )

inline

Definition at line 152 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

  {
    std::vector<float> scales;
    for (int i=0; i<this->NumberOfSigmaSteps; i++)
      {
      scales.push_back(this->ComputeSigmaValue(i));
      }
    this->GetImageFilterPointer()->SetScales(scales);
#if (VTK_MAJOR_VERSION <= 5) 
    if (this->GetOutput(0))
      {
        this->GetOutput(0)->Update();
        if ( this->GetOutput(0)->GetSource() )
          {
            //          this->SetErrorCode( this->GetOutput(0)->GetSource()->GetErrorCode() );
          }
      }
#endif
  }

GetImageFilterPointer()

ImageFilterType* vtkvmtkVesselEnhancingDiffusion3DImageFilter::GetImageFilterPointer ( )

inlineprotected

Definition at line 195 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

{ return dynamic_cast<ImageFilterType*>(m_Filter.GetPointer()); }

Member Data Documentation

SigmaMin

double vtkvmtkVesselEnhancingDiffusion3DImageFilter::SigmaMin

protected

Definition at line 198 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

SigmaMax

double vtkvmtkVesselEnhancingDiffusion3DImageFilter::SigmaMax

protected

Definition at line 199 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

NumberOfSigmaSteps

int vtkvmtkVesselEnhancingDiffusion3DImageFilter::NumberOfSigmaSteps

protected

Definition at line 200 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

SigmaStepMethod

int vtkvmtkVesselEnhancingDiffusion3DImageFilter::SigmaStepMethod

protected

Definition at line 201 of file vtkvmtkVesselEnhancingDiffusion3DImageFilter.h.

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The documentation for this class was generated from the following file:

• vtkvmtkVesselEnhancingDiffusion3DImageFilter.h